Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Embryonic limb
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse embryonic day 11.5 (e11.5) limb, control
strain
129/C57BL/6
genotype/variation
SMARCA4/FLAG knock-in
Sex
pooled male and female
age
embryonic day 11.5 (e11.5)
tissue
limb
chip antibody
none

Sequenced DNA Library

library_name
GSM912550: mouse_e11.5_limb_control
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
66096759
Reads aligned (%)
85.4
Duplicates removed (%)
41.1
Number of peaks
15022 (qval < 1E-05)

mm9

Number of total reads
66096759
Reads aligned (%)
84.7
Duplicates removed (%)
40.8
Number of peaks
13621 (qval < 1E-05)

Base call quality data from DBCLS SRA