Antigen

Antigen Class

TFs and others

Antigen

AR

Cell type

Cell type Class

Breast

Cell type

MDA-MB-453

Primary Tissue

Breast

Site of Extraction

Effusion, Pericardial

Tissue Diagnosis

Carcinoma

Sample

source_name

Mammary gland/breast metastatic carcinoma

cell line

MDA_MB_453

gender

female

chip antibody

AR (Santa Cruz Biotech, N-20, sc-816)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP-seq was carried out as described by Schmidt et al. Methods 48, 240-8 (2009) Tru-seq libraries were prepared and sequenced by Illumina sequencing.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

17726895

Reads aligned (%)

95.8

Duplicates removed (%)

2.9

Number of peaks

7190 (qval < 1E-05)

hg19

Number of total reads

17726895

Reads aligned (%)

95.2

Duplicates removed (%)

3.8

Number of peaks

7293 (qval < 1E-05)