Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TP53

Cell type

Cell type Class
Epidermis
Cell type
MDAH087
NA
NA

Attributes by original data submitter

Sample

source_name
MDAH087 fibroblast cell line
cell type
Fibroblast cells from Li Fraumeni patient
mutant p53
R248W
antibody
p53 (FL-393; Santa Cruz; sc-6243)

Sequenced DNA Library

library_name
GSM900168: MDAH087_p53_ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
34950595
Reads aligned (%)
62.2
Duplicates removed (%)
4.1
Number of peaks
1272 (qval < 1E-05)

hg38

Number of total reads
34950595
Reads aligned (%)
63.5
Duplicates removed (%)
2.9
Number of peaks
1027 (qval < 1E-05)

Base call quality data from DBCLS SRA