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Install and launch IGV before selecting data to visualize
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: BEAF-32
wikigenes
PDBj
CellType: Imaginal wing disc
ATCC
MeSH
RIKEN BRC
SRX131079
GSM900004: BEAF-32 Wingchip1; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
BEAF-32
Cell type
Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA
Attributes by original data submitter
Sample
source_name
ChIP against BEAF-32 Wing
strain
Orgon R
tissue
L3 Wing imaginal disc-3rd instar
chip antibody
BEAF-32B (Bushey et. al 2009)
Sequenced DNA Library
library_name
GSM900004: BEAF-32_Wingchip1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
dm3
Number of total reads
9218552
Reads aligned (%)
3.8
Duplicates removed (%)
81.3
Number of peaks
962 (qval < 1E-05)
dm6
Number of total reads
9218552
Reads aligned (%)
2.9
Duplicates removed (%)
85.6
Number of peaks
435 (qval < 1E-05)
Base call quality data from
DBCLS SRA