SRX130611
GSM898063: GCB INPUT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Primary cells
cell line
Germinal center B cells
chip antibody
none (INPUT)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
181102759
Reads aligned (%)
96.4
Duplicates removed (%)
16.8
Number of peaks
3050 (qval < 1E-05)

hg19

Number of total reads
181102759
Reads aligned (%)
95.5
Duplicates removed (%)
18.1
Number of peaks
2412 (qval < 1E-05)

Base call quality data from DBCLS SRA