SRX130608
GSM898060: GCB BCL6 ChIP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BCL6

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Primary cells
cell line
Germinal center B cells
chip antibody
BCL6

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
172080810
Reads aligned (%)
97.0
Duplicates removed (%)
26.9
Number of peaks
30003 (qval < 1E-05)

hg19

Number of total reads
172080810
Reads aligned (%)
96.2
Duplicates removed (%)
28.6
Number of peaks
29370 (qval < 1E-05)

Base call quality data from DBCLS SRA