SRX130605
GSM898057: OCI-LY1 NCOR-p300 INPUT

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
OCI-LY1
NA
NA

Attributes by original data submitter

Sample

source_name
Human DLBCL cel line
cell line
OCI-LY1
chip antibody
none (INPUT)

Sequenced DNA Library

library_name
GSM898057: OCI-LY1_NCOR-p300_INPUT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
51930521
Reads aligned (%)
87.3
Duplicates removed (%)
4.6
Number of peaks
1214 (qval < 1E-05)

hg19

Number of total reads
51930521
Reads aligned (%)
86.5
Duplicates removed (%)
6.3
Number of peaks
1355 (qval < 1E-05)

Base call quality data from DBCLS SRA