Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Cbx8

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

source_name
Bone marrow cells_flagCbx8_flagChIP
strain
C57BL/6
cell type
hematopoietic stem/progenitor cells
transduced with
flagCbx8
culture age
7 days
chip antibody
M2 Flag-agarose beads
chip antibody vendor
Sigma

Sequenced DNA Library

library_name
GSM898201: flagCbx8_flagChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
28744154
Reads aligned (%)
64.1
Duplicates removed (%)
22.5
Number of peaks
4531 (qval < 1E-05)

mm9

Number of total reads
28744154
Reads aligned (%)
64.0
Duplicates removed (%)
22.6
Number of peaks
4496 (qval < 1E-05)

Base call quality data from DBCLS SRA