Antigen

Antigen Class

TFs and others

Antigen

LYL1

Cell type

Cell type Class

Blood

Cell type

THP-1

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Acute Myelogenous

Sample

source_name

THP-1 cells

cell line

THP-1

cell type

monocyte

disease

acute myeloblastic leukemia

chip antibody

anti-LYL1

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from crosslinked and sonicated cells and JMJD1C-DNA or LYL1-DNA complexes were isolated with antibody. Libraries were prepared according to Illumina's instructions

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

34723386

Reads aligned (%)

97.9

Duplicates removed (%)

7.5

Number of peaks

2563 (qval < 1E-05)

hg19

Number of total reads

34723386

Reads aligned (%)

96.9

Duplicates removed (%)

9.1

Number of peaks

2388 (qval < 1E-05)