Antigen

Antigen Class

TFs and others

Antigen

LYL1

Cell type

Cell type Class

Blood

Cell type

Kasumi-1

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Acute Myelogenous

Sample

source_name

Kasumi-1 Cells

cell line

Kasumi-1

cell type

myeloblast

disease

acute myeloblastic leukemia

chip antibody

anti-LYL1

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from crosslinked and sonicated cells and JMJD1C-DNA or LYL1-DNA complexes were isolated with antibody. Libraries were prepared according to Illumina's instructions

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg19

Number of total reads

36843399

Reads aligned (%)

97.0

Duplicates removed (%)

16.3

Number of peaks

7860 (qval < 1E-05)

hg38

Number of total reads

36843399

Reads aligned (%)

98.0

Duplicates removed (%)

14.6

Number of peaks

7997 (qval < 1E-05)