Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Tet2

Cell type

Cell type Class
Blood
Cell type
Bone Marrow Cells
MeSH Description
Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Attributes by original data submitter

Sample

source_name
Bone Marrow_Tet2
strain
C57BL/6
tissue
Bone Marrow
chip antibody
Tet2
chip antibody vendor
Santa Cruz

Sequenced DNA Library

library_name
GSM897581: Bone marrow_Tet2 ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
73255638
Reads aligned (%)
90.4
Duplicates removed (%)
40.9
Number of peaks
1170 (qval < 1E-05)

mm9

Number of total reads
73255638
Reads aligned (%)
90.2
Duplicates removed (%)
40.9
Number of peaks
1240 (qval < 1E-05)

Base call quality data from DBCLS SRA