Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
OGT

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
H293T_HT OGT
cell line
H293T
genotype/variation
HT-OGT overexpression

Sequenced DNA Library

library_name
GSM897578: HT-OGT ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
42423294
Reads aligned (%)
30.0
Duplicates removed (%)
67.4
Number of peaks
745 (qval < 1E-05)

hg38

Number of total reads
42423294
Reads aligned (%)
31.2
Duplicates removed (%)
66.2
Number of peaks
730 (qval < 1E-05)

Base call quality data from DBCLS SRA