SRX129680
GSM896017: H3K9/14Ac; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9K14ac

Cell type

Cell type Class
Others
Cell type
TC-797
NA
NA

Attributes by original data submitter

Sample

source_name
TC-797
cell type
NUT Midline Carcinoma cell line
cell line
TC-797
Sex
female
antibody_target
Histone H3 Lysine 9/14 acetylation

Sequenced DNA Library

library_name
GSM896017: H3K9/14Ac
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
112831232
Reads aligned (%)
63.3
Duplicates removed (%)
88.0
Number of peaks
5985 (qval < 1E-05)

hg19

Number of total reads
112831232
Reads aligned (%)
62.9
Duplicates removed (%)
89.3
Number of peaks
5076 (qval < 1E-05)

Base call quality data from DBCLS SRA