Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MED1

Cell type

Cell type Class
Blood
Cell type
Multiple Myeloma
MeSH Description
A malignancy of mature PLASMA CELLS engaging in monoclonal immunoglobulin production. It is characterized by hyperglobulinemia, excess Bence-Jones proteins (free monoclonal IMMUNOGLOBULIN LIGHT CHAINS) in the urine, skeletal destruction, bone pain, and fractures. Other features include ANEMIA; HYPERCALCEMIA; and RENAL INSUFFICIENCY.

Attributes by original data submitter

Sample

source_name
Multiple myeloma
chip antibody
Med1/TRAP220
cell type
Plasma cell
duration
24hours
drug
DMSO

Sequenced DNA Library

library_name
GSM894109: MM1S_MED1_DMSO
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
47888067
Reads aligned (%)
75.3
Duplicates removed (%)
14.1
Number of peaks
1550 (qval < 1E-05)

hg38

Number of total reads
47888067
Reads aligned (%)
76.9
Duplicates removed (%)
13.1
Number of peaks
1353 (qval < 1E-05)

Base call quality data from DBCLS SRA