SRX129102
GSM894094: P493-6 T1 WCE; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
P493-6
NA
NA

Attributes by original data submitter

Sample

source_name
B-cell lymphoma
chip antibody
None
cell type
P493-6

Sequenced DNA Library

library_name
GSM894094: P493-6_T1_WCE
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
42963828
Reads aligned (%)
80.4
Duplicates removed (%)
5.6
Number of peaks
678 (qval < 1E-05)

hg19

Number of total reads
42963828
Reads aligned (%)
79.5
Duplicates removed (%)
6.4
Number of peaks
1194 (qval < 1E-05)

Base call quality data from DBCLS SRA