SRX129099
GSM894091: H128 WCE CHROM; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
NCI-H128
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Small Cell

Attributes by original data submitter

Sample

source_name
Small Cell Lung Carcinoma
chip antibody
None
cell type
H128

Sequenced DNA Library

library_name
GSM894091: H128_WCE_CHROM
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
27712682
Reads aligned (%)
81.7
Duplicates removed (%)
3.2
Number of peaks
10360 (qval < 1E-05)

hg19

Number of total reads
27712682
Reads aligned (%)
81.2
Duplicates removed (%)
3.8
Number of peaks
10058 (qval < 1E-05)

Base call quality data from DBCLS SRA