Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
Multiple Myeloma
MeSH Description
A malignancy of mature PLASMA CELLS engaging in monoclonal immunoglobulin production. It is characterized by hyperglobulinemia, excess Bence-Jones proteins (free monoclonal IMMUNOGLOBULIN LIGHT CHAINS) in the urine, skeletal destruction, bone pain, and fractures. Other features include ANEMIA; HYPERCALCEMIA; and RENAL INSUFFICIENCY.

Attributes by original data submitter

Sample

source_name
Multiple myeloma
chip antibody
H3K4me3
cell type
Plasma cell
duration
24hours
drug
DMSO

Sequenced DNA Library

library_name
GSM894084: MM1S_H3K4ME3_DMSO
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
24898100
Reads aligned (%)
96.0
Duplicates removed (%)
5.6
Number of peaks
43714 (qval < 1E-05)

hg19

Number of total reads
24898100
Reads aligned (%)
95.6
Duplicates removed (%)
5.9
Number of peaks
43647 (qval < 1E-05)

Base call quality data from DBCLS SRA