Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MED1

Cell type

Cell type Class
Blood
Cell type
P493-6
NA
NA

Attributes by original data submitter

Sample

source_name
B-cell lymphoma
chip antibody
Med1/TRAP220
cell type
P493-6

Sequenced DNA Library

library_name
GSM894079: P493-6_T1_MED1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
31014914
Reads aligned (%)
51.1
Duplicates removed (%)
39.0
Number of peaks
1185 (qval < 1E-05)

hg38

Number of total reads
31014914
Reads aligned (%)
52.7
Duplicates removed (%)
37.8
Number of peaks
1206 (qval < 1E-05)

Base call quality data from DBCLS SRA