SRX129077
GSM894069: P493-6 T1 H3K4ME3; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
P493-6
NA
NA

Attributes by original data submitter

Sample

source_name
B-cell lymphoma
chip antibody
H3K4me3
cell type
P493-6

Sequenced DNA Library

library_name
GSM894069: P493-6_T1_H3K4ME3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
24008050
Reads aligned (%)
96.2
Duplicates removed (%)
21.3
Number of peaks
25320 (qval < 1E-05)

hg19

Number of total reads
24008050
Reads aligned (%)
95.6
Duplicates removed (%)
21.3
Number of peaks
26154 (qval < 1E-05)

Base call quality data from DBCLS SRA