SRX128785
GSM722172: Input ChIP-seq in Jurkat 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Jurkat (Clone E6-1)
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
06172009_42A7LAAXX_B7
chip antibody
None
antibody catalog number
None WCE
cell line
Jurkat E6-1
cell number
na

Sequenced DNA Library

library_name
GSM722172: Input ChIP-seq in Jurkat 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
19750081
Reads aligned (%)
1.2
Duplicates removed (%)
0.7
Number of peaks
1 (qval < 1E-05)

hg19

Number of total reads
19750081
Reads aligned (%)
1.1
Duplicates removed (%)
0.9
Number of peaks
2 (qval < 1E-05)

Base call quality data from DBCLS SRA