Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GATA3

Cell type

Cell type Class
Blood
Cell type
Jurkat (Clone E6-1)
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
10162009_42YHYAAXX_B1
chip antibody
GATA3
antibody catalog number
Santa Cruz SC-22206
cell line
Jurkat E6-1
cell number
30 million

Sequenced DNA Library

library_name
GSM722168: GATA3 ChIP-seq in Jurkat
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
10978564
Reads aligned (%)
37.4
Duplicates removed (%)
21.6
Number of peaks
2873 (qval < 1E-05)

hg38

Number of total reads
10978564
Reads aligned (%)
38.3
Duplicates removed (%)
20.6
Number of peaks
2832 (qval < 1E-05)

Base call quality data from DBCLS SRA