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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: TCF12
wikigenes
PDBj
CellType: Jurkat (Clone E6-1)
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX128779
GSM722166: TCF12/HEB ChIP-seq in Jurkat
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
TCF12
Cell type
Cell type Class
Blood
Cell type
Jurkat (Clone E6-1)
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic
Attributes by original data submitter
Sample
source_name
06172009_42A7LAAXX_B1
chip antibody
TCF12/HEB
antibody catalog number
Santa Cruz SC-357
cell line
Jurkat E6-1
cell number
10 million
Sequenced DNA Library
library_name
GSM722166: TCF12/HEB ChIP-seq in Jurkat
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
23310501
Reads aligned (%)
42.0
Duplicates removed (%)
15.4
Number of peaks
860 (qval < 1E-05)
hg19
Number of total reads
23310501
Reads aligned (%)
41.4
Duplicates removed (%)
16.7
Number of peaks
859 (qval < 1E-05)
Base call quality data from
DBCLS SRA