SRX128778
GSM722165: TAL1 ChIP-seq in Jurkat 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TAL1

Cell type

Cell type Class
Blood
Cell type
Jurkat (Clone E6-1)
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
10162009_42YHYAAXX_B3
chip antibody
TAL1
antibody catalog number
Santa Cruz SC-12984
cell line
Jurkat E6-1
cell number
30 million

Sequenced DNA Library

library_name
GSM722165: TAL1 ChIP-seq in Jurkat 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13876796
Reads aligned (%)
55.2
Duplicates removed (%)
11.4
Number of peaks
2371 (qval < 1E-05)

hg19

Number of total reads
13876796
Reads aligned (%)
54.7
Duplicates removed (%)
12.5
Number of peaks
2434 (qval < 1E-05)

Base call quality data from DBCLS SRA