Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells
antibody
H3K27ac, Abcam, ab4729
cell source
Primary Human T cells isolated from buffy coat preparations and sorted
cell type
activated T conventional cells (CD4+ CD25mid CD45RO+) from donor 24

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
DNA was extracted by ChIP-seq Standard Illumina library prep

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
47036054
Reads aligned (%)
91.4
Duplicates removed (%)
4.7
Number of peaks
3403 (qval < 1E-05)

hg19

Number of total reads
47036054
Reads aligned (%)
90.5
Duplicates removed (%)
5.8
Number of peaks
3167 (qval < 1E-05)

Base call quality data from DBCLS SRA