Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Lgr1

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2-DRSC cells
cell line
S2-DRSC cells
chip antibody
FSH-S and FSH-L
chip antibody source
Igor Dawid, Laboratory of Molecular Genetics, PGD, NICHD

Sequenced DNA Library

library_name
GSM892450: Dm S2-DRSC FSH-S+L ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

dm3

Number of total reads
31546612
Reads aligned (%)
94.6
Duplicates removed (%)
42.2
Number of peaks
16500 (qval < 1E-05)

dm6

Number of total reads
31546612
Reads aligned (%)
94.3
Duplicates removed (%)
45.8
Number of peaks
14149 (qval < 1E-05)

Base call quality data from DBCLS SRA