Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Hematopoietic progenitors
NA
NA

Attributes by original data submitter

Sample

source_name
HPC input DNA
strain
129-M2rtTA
cell type
mouse hematopoietic progenitor cells
passage
0

Sequenced DNA Library

library_name
GSM886502: 2-HPC* input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
35250306
Reads aligned (%)
98.7
Duplicates removed (%)
8.3
Number of peaks
289 (qval < 1E-05)

mm9

Number of total reads
35250306
Reads aligned (%)
98.6
Duplicates removed (%)
8.3
Number of peaks
265 (qval < 1E-05)

Base call quality data from DBCLS SRA