Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
ESC input DNA
strain
129
cell type
embryonic stem cells
passage
20-22

Sequenced DNA Library

library_name
GSM886491: R1-ESC input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
29257915
Reads aligned (%)
94.1
Duplicates removed (%)
7.3
Number of peaks
313 (qval < 1E-05)

mm9

Number of total reads
29257915
Reads aligned (%)
94.0
Duplicates removed (%)
7.3
Number of peaks
320 (qval < 1E-05)

Base call quality data from DBCLS SRA