SRX124700
GSM883676: C91 input DNA; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Digestive tract
Cell type
Crypt
NA
NA

Attributes by original data submitter

Sample

source_name
Normal Colon Crypt_input DNA
cell type
Normal Colon Crypt

Sequenced DNA Library

library_name
GSM883676: C91_input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
36388650
Reads aligned (%)
97.3
Duplicates removed (%)
2.5
Number of peaks
1345 (qval < 1E-05)

hg19

Number of total reads
36388650
Reads aligned (%)
96.4
Duplicates removed (%)
4.0
Number of peaks
1504 (qval < 1E-05)

Base call quality data from DBCLS SRA