SRX124694
GSM883670: V481 input DNA; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Digestive tract
Cell type
Colon cancer
NA
NA

Attributes by original data submitter

Sample

source_name
Colon cancer_input DNA
cell type
Colon Cancer

Sequenced DNA Library

library_name
GSM883670: V481_input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
33116522
Reads aligned (%)
10.0
Duplicates removed (%)
1.1
Number of peaks
65 (qval < 1E-05)

hg19

Number of total reads
33116522
Reads aligned (%)
9.9
Duplicates removed (%)
1.5
Number of peaks
91 (qval < 1E-05)

Base call quality data from DBCLS SRA