Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Digestive tract
Cell type
Colon cancer
NA
NA

Attributes by original data submitter

Sample

source_name
Colon cancer_input DNA
cell type
Colon Cancer

Sequenced DNA Library

library_name
GSM883669: V457_input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
21739055
Reads aligned (%)
98.5
Duplicates removed (%)
2.0
Number of peaks
458 (qval < 1E-05)

hg19

Number of total reads
21739055
Reads aligned (%)
97.4
Duplicates removed (%)
3.3
Number of peaks
691 (qval < 1E-05)

Base call quality data from DBCLS SRA