Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Orc2

Cell type

Cell type Class
Embryo
Cell type
4-7h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
4-7hr ORC ChIP-Seq ChIP Oregon-R strain Replicate 3
strain
Oregon-R(official name : Oregon-R-modENCODE genotype : wild type )
developmental stage
Embryo 4-7h
genotype
wild type

Sequenced DNA Library

library_name
GSM881219: 4-7hr ORC ChIP-Seq ChIP Oregon-R strain Replicate 3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
4950487
Reads aligned (%)
92.1
Duplicates removed (%)
3.5
Number of peaks
1056 (qval < 1E-05)

dm6

Number of total reads
4950487
Reads aligned (%)
89.2
Duplicates removed (%)
5.9
Number of peaks
510 (qval < 1E-05)

Base call quality data from DBCLS SRA