SRX122624
GSM881345: E14 IgG ChIP-seq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
mouse embryonic stem cells (E14)
cell type
mouse embryonic stem cells (E14)
ChIP
IgG

Sequenced DNA Library

library_name
GSM881345: E14_IgG_ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
5038857
Reads aligned (%)
98.6
Duplicates removed (%)
43.3
Number of peaks
67 (qval < 1E-05)

mm9

Number of total reads
5038857
Reads aligned (%)
98.5
Duplicates removed (%)
43.5
Number of peaks
50 (qval < 1E-05)

Base call quality data from DBCLS SRA