Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rel

Cell type

Cell type Class
Blood
Cell type
Dendritic Cells
MeSH Description
ANTIGEN-PRESENTING CELLS of dendritic cell morphology found in the LYMPH NODES and other lymphoid tissues.

Attributes by original data submitter

Sample

source_name
bone marrow
cell type
bone marrow-derived dendritic cells
strain
C57BL/6
chip antibody
Rel
treatment
LPS
time
120 min

Sequenced DNA Library

library_name
GSM881163: ChIP-Seq of Rel 120 min post LPS stimulation paired-end
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1000

mm10

Number of total reads
4020531
Reads aligned (%)
29.4
Duplicates removed (%)
1.7
Number of peaks
37 (qval < 1E-05)

mm9

Number of total reads
4020531
Reads aligned (%)
29.3
Duplicates removed (%)
1.8
Number of peaks
34 (qval < 1E-05)

Base call quality data from DBCLS SRA