Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Stat1

Cell type

Cell type Class
Blood
Cell type
Dendritic Cells
MeSH Description
ANTIGEN-PRESENTING CELLS of dendritic cell morphology found in the LYMPH NODES and other lymphoid tissues.

Attributes by original data submitter

Sample

source_name
bone marrow
cell type
bone marrow-derived dendritic cells
strain
C57BL/6
chip antibody
Stat1
treatment
LPS
time
0 min
chip antibody manufacturer 1
Santa Cruz
chip antibody catalog number 1
sc-346
chip antibody manufacturer 2
Bethyl
chip antibody catalog number 2
A302-753A

Sequenced DNA Library

library_name
GSM881155: ChIP-Seq of Stat1 0 min post LPS stimulation
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1000

mm10

Number of total reads
10597608
Reads aligned (%)
84.7
Duplicates removed (%)
15.1
Number of peaks
167 (qval < 1E-05)

mm9

Number of total reads
10597608
Reads aligned (%)
84.6
Duplicates removed (%)
15.1
Number of peaks
122 (qval < 1E-05)

Base call quality data from DBCLS SRA