Antigen

Antigen Class

TFs and others

Antigen

Egr1

Cell type

Cell type Class

Blood

Cell type

Dendritic Cells

MeSH Description

ANTIGEN-PRESENTING CELLS of dendritic cell morphology found in the LYMPH NODES and other lymphoid tissues.

Sample

source_name

bone marrow

cell type

bone marrow-derived dendritic cells

strain

C57BL/6

chip antibody

Egr1

treatment

LPS

time

120 min

chip antibody manufacturer 1

Abcam

chip antibody catalog number 1

ab54966-100

chip antibody manufacturer 2

Santa Cruz

chip antibody catalog number 2

sc-110

Sequenced DNA Library

library_name

GSM881140: ChIP-Seq of Egr1 120 min post LPS stimulation

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 1000

mm10

Number of total reads

11618713

Reads aligned (%)

69.2

Duplicates removed (%)

16.5

Number of peaks

441 (qval < 1E-05)

mm9

Number of total reads

11618713

Reads aligned (%)

68.9

Duplicates removed (%)

16.8

Number of peaks

519 (qval < 1E-05)