Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Atf3

Cell type

Cell type Class
Blood
Cell type
Dendritic Cells
MeSH Description
ANTIGEN-PRESENTING CELLS of dendritic cell morphology found in the LYMPH NODES and other lymphoid tissues.

Attributes by original data submitter

Sample

source_name
bone marrow
cell type
bone marrow-derived dendritic cells
strain
C57BL/6
chip antibody
Atf3
treatment
LPS
time
30 min
chip antibody manufacturer 1
Santa Cruz
chip antibody catalog number 1
sc-188
chip antibody manufacturer 2
Abcam
chip antibody catalog number 2
ab70005-100

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
1815148
Reads aligned (%)
66.1
Duplicates removed (%)
6.8
Number of peaks
56 (qval < 1E-05)

mm9

Number of total reads
1815148
Reads aligned (%)
66.0
Duplicates removed (%)
7.0
Number of peaks
46 (qval < 1E-05)

Base call quality data from DBCLS SRA