SRX120424
GSM877317: Ebf1 ChIP; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ebf1

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
splenic B cells
strain
C57BL/6
chip antibody
Ebf1 (custom-made against murine Ebf1b)

Sequenced DNA Library

library_name
GSM877317: Ebf1_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
35603739
Reads aligned (%)
91.9
Duplicates removed (%)
8.7
Number of peaks
2518 (qval < 1E-05)

mm9

Number of total reads
35603739
Reads aligned (%)
91.7
Duplicates removed (%)
8.8
Number of peaks
2506 (qval < 1E-05)

Base call quality data from DBCLS SRA