SRX120231
GSM876649: WT.Mature B.Input [8094]; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mature B
genotype/variation
WT
strain
C57BL/6
chip antibody
NA
extraction method
Ex vivo (MACS sort)
tissue
Lymph Node

Sequenced DNA Library

library_name
GSM876649: WT.Mature_B.Input [8094]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
4885884
Reads aligned (%)
97.8
Duplicates removed (%)
8.8
Number of peaks
186 (qval < 1E-05)

mm9

Number of total reads
4885884
Reads aligned (%)
97.6
Duplicates removed (%)
9.2
Number of peaks
220 (qval < 1E-05)

Base call quality data from DBCLS SRA