Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mature B
genotype/variation
WT
strain
C57BL/6
chip antibody
NA
extraction method
Ex vivo (MACS sort)
tissue
Lymph Node

Sequenced DNA Library

library_name
GSM876646: WT.Mature_B.Input [8089]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
5412640
Reads aligned (%)
96.6
Duplicates removed (%)
8.7
Number of peaks
378 (qval < 1E-05)

mm9

Number of total reads
5412640
Reads aligned (%)
96.4
Duplicates removed (%)
9.1
Number of peaks
406 (qval < 1E-05)

Base call quality data from DBCLS SRA