Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ebf1

Cell type

Cell type Class
Blood
Cell type
Pro-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Pro-B
genotype/variation
Rag2(–/–)
strain
C57BL/6
chip antibody
anti EBF1 #0647 homemade
extraction method
4-5 day culture (Cd19+ cells from Bone marrow)
tissue
Bone Marrow

Sequenced DNA Library

library_name
GSM876623: EBF1 ChIP-seq [8246.2]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
15504838
Reads aligned (%)
45.0
Duplicates removed (%)
6.2
Number of peaks
3769 (qval < 1E-05)

mm9

Number of total reads
15504838
Reads aligned (%)
44.9
Duplicates removed (%)
6.5
Number of peaks
3745 (qval < 1E-05)

Base call quality data from DBCLS SRA