SRX118197
GSM867828: input DNA

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Rbp2 f/f ES cells
strain
C57BL/6
genotype/variation
Rbp2 f/f wild type
cell type
embryonic stem cells
chip antibody
none

Sequenced DNA Library

library_name
GSM867828: input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
11604899
Reads aligned (%)
94.0
Duplicates removed (%)
5.2
Number of peaks
382 (qval < 1E-05)

mm9

Number of total reads
11604899
Reads aligned (%)
93.8
Duplicates removed (%)
5.4
Number of peaks
425 (qval < 1E-05)

Base call quality data from DBCLS SRA