SRX118010
GSM865742: GPS2 ChIP-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GPS2

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
293T cells
cell type
293T
antibody
anti-GPS2

Sequenced DNA Library

library_name
GSM865742: GPS2 ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
16748024
Reads aligned (%)
62.6
Duplicates removed (%)
10.9
Number of peaks
522 (qval < 1E-05)

hg19

Number of total reads
16748024
Reads aligned (%)
62.4
Duplicates removed (%)
11.1
Number of peaks
583 (qval < 1E-05)

Base call quality data from DBCLS SRA