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For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Gata1
wikigenes
PDBj
CellType: mESC derived haematopoietic progenitor
ATCC
MeSH
RIKEN BRC
SRX118003
GSM867158: GATA1 ESEP Differentiating Rep2; Mus musculus; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Gata1
Cell type
Cell type Class
Pluripotent stem cell
Cell type
mESC derived haematopoietic progenitor
NA
NA
Attributes by original data submitter
Sample
source_name
ES-cell derived erythroid progenitors
chip antibody
polyclonal rabbit a-GATA-1 produced in-house (H Im et al. PNAS 2005)
growth condition
Differentiating
cell type
ES-cell derived erythroid progenitors
cell line
ES-EP
Sequenced DNA Library
library_name
GSM867158: GATA1 ESEP Differentiating Rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
11654766
Reads aligned (%)
94.7
Duplicates removed (%)
11.3
Number of peaks
1734 (qval < 1E-05)
mm9
Number of total reads
11654766
Reads aligned (%)
94.5
Duplicates removed (%)
11.5
Number of peaks
1772 (qval < 1E-05)
Base call quality data from
DBCLS SRA