SRX117813
GSM866202: Input mm9ES wt; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
mm9ES_wt_Input DNA
genotype/variation
wild type
cell type
embryonic stem (ES) cells

Sequenced DNA Library

library_name
GSM866202: Input mm9ES wt
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
21373012
Reads aligned (%)
82.7
Duplicates removed (%)
7.9
Number of peaks
669 (qval < 1E-05)

mm9

Number of total reads
21373012
Reads aligned (%)
82.6
Duplicates removed (%)
8.0
Number of peaks
731 (qval < 1E-05)

Base call quality data from DBCLS SRA