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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: VEZF1
wikigenes
PDBj
CellType: HeLa
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX117808
GSM866197: HA-flag-Vezf1 ChIP-Seq Sample 2; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
VEZF1
Cell type
Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma
Attributes by original data submitter
Sample
source_name
HeLa_HA-flag-Vezf1 ChIP-Seq
cell line
HeLa-S3
cell type
HELA cell culture
chip antibody
Anti-FLAG M2
Sequenced DNA Library
library_name
GSM866197: HA-flag-Vezf1 ChIP-Seq Sample 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer IIx
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
18925996
Reads aligned (%)
69.7
Duplicates removed (%)
6.1
Number of peaks
1880 (qval < 1E-05)
hg19
Number of total reads
18925996
Reads aligned (%)
69.2
Duplicates removed (%)
7.1
Number of peaks
2083 (qval < 1E-05)
Base call quality data from
DBCLS SRA