Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
VEZF1

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa_HA-flag-Vezf1 ChIP-Seq
cell line
HeLa-S3
cell type
HELA cell culture
chip antibody
Anti-FLAG M2

Sequenced DNA Library

library_name
GSM866197: HA-flag-Vezf1 ChIP-Seq Sample 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
18925996
Reads aligned (%)
64.3
Duplicates removed (%)
7.1
Number of peaks
2083 (qval < 1E-05)

hg38

Number of total reads
18925996
Reads aligned (%)
65.4
Duplicates removed (%)
6.1
Number of peaks
1880 (qval < 1E-05)

Base call quality data from DBCLS SRA