SRX117690
GSM865712: H3R2me2sK4me3 ChIP-seq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3R2me2K4me3

Cell type

Cell type Class
Blood
Cell type
Pro-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Pro-B_H3R2me2sK4me3 ChIP-seq
strain
C57BL/7
cell type
RAG2-/- Abelson-transformed pro-B cells
chip antibody
H3R2me2sK4me3

Sequenced DNA Library

library_name
GSM865712: H3R2me2sK4me3 ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
16951036
Reads aligned (%)
67.0
Duplicates removed (%)
23.7
Number of peaks
15489 (qval < 1E-05)

mm9

Number of total reads
16951036
Reads aligned (%)
66.9
Duplicates removed (%)
23.8
Number of peaks
15529 (qval < 1E-05)

Base call quality data from DBCLS SRA