Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
Chronic myeloid leukaemia
cell line
Human erythromyeloblastoid leukemia cell line K562
cell type
Cultured cancer cell line
cell cycle stage
S
chip antibody
H3K4me3 (Millipore, Lot# RF0807002, cat# CS20580)

Sequenced DNA Library

library_name
GSM865281: K562_S_H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
10357685
Reads aligned (%)
98.9
Duplicates removed (%)
33.2
Number of peaks
28262 (qval < 1E-05)

hg19

Number of total reads
10357685
Reads aligned (%)
98.7
Duplicates removed (%)
33.4
Number of peaks
28111 (qval < 1E-05)

Base call quality data from DBCLS SRA