Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EP300

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H1
NA
NA

Attributes by original data submitter

Sample

source_name
H1 hESCs-P300 ChIP-seq
cell type
H1 ES cells were grown in TeSR media on Matrigel (Cellular Dynamics)
chip antibody
Santa cruz, 48343 X

Sequenced DNA Library

library_name
GSM831036: H1_P300
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
28704285
Reads aligned (%)
66.4
Duplicates removed (%)
20.3
Number of peaks
3003 (qval < 1E-05)

hg38

Number of total reads
28704285
Reads aligned (%)
67.9
Duplicates removed (%)
19.2
Number of peaks
3003 (qval < 1E-05)

Base call quality data from DBCLS SRA