Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EZH2

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H1
NA
NA

Attributes by original data submitter

Sample

source_name
H1 hESCs-EZH2 ChIP-seq
cell type
H1 ES cells were grown in TeSR media on Matrigel (Cellular Dynamics)
chip antibody
Active motif,39901

Sequenced DNA Library

library_name
GSM831028: H1_EZH2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
36880200
Reads aligned (%)
44.9
Duplicates removed (%)
33.1
Number of peaks
951 (qval < 1E-05)

hg38

Number of total reads
36880200
Reads aligned (%)
46.0
Duplicates removed (%)
31.9
Number of peaks
813 (qval < 1E-05)

Base call quality data from DBCLS SRA