SRX116452
GSM831024: K562 WCE 3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-WCE
cell type
K562 erythrocytic leukaemia cells (ATCC CCL-243)
chip antibody
None

Sequenced DNA Library

library_name
GSM831024: K562_WCE_3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
6311408
Reads aligned (%)
92.2
Duplicates removed (%)
3.0
Number of peaks
84 (qval < 1E-05)

hg19

Number of total reads
6311408
Reads aligned (%)
91.9
Duplicates removed (%)
3.4
Number of peaks
92 (qval < 1E-05)

Base call quality data from DBCLS SRA